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| A dynamic programming algorithm for generating chemical isomers based on frequency vectors |
| [ 全著者名 ] Ryota Ido, Naveed Ahmed Azam, Jianshen Zhu, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] Scientific Reports |
| [ 掲載年月 ] 2025年 7月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| Systematic evaluation of the isolated effect of tissue environment on the transcriptome using a single-cell RNA-seq atlas dataset |
| [ 全著者名 ] Daigo Okada, Jianshen Zhu, Kan Shota, Yuuki Nishimura, Kazuya Haraguchi |
| [ 掲載誌名 ] BMC GENOMICS |
| [ 掲載年月 ] 2025年 4月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| A unified approach to inferring chemical compounds with the desired aqueous solubility |
| [ 全著者名 ] Muniba Batool, Naveed Ahmed Azam, Jianshen Zhu, Kazuya Haraguchi, Liang Zhao, Tatsuya Akutsu |
| [ 掲載誌名 ] Journal of Cheminformatics |
| [ 掲載年月 ] 2025年 3月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| Quadratic Descriptors and Reduction Methods in a Two-Layered Model for Compound Inference |
| [ 全著者名 ] Jianshen Zhu, Naveed Ahmed Azam, Shengjuan Cao, Ryota Ido, Kazuya Haraguchi, Liang Zhao, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] Frontiers in Genetics |
| [ 掲載年月 ] 2025年 1月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| A method for inferring polymers based on linear regression and integer programming |
| [ 全著者名 ] Ryota Ido, Shengjuan Cao, Jianshen Zhu, Naveed Ahmed Azam, Kazuya Haraguchi, Liang Zhao, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] IEEE-ACM Transactions on Computational Biology and Bioinformatics |
| [ 掲載年月 ] 2024年 8月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| Molecular design based on integer programming and splitting data sets by hyperplanes |
| [ 全著者名 ] Jianshen Zhu, Naveed Ahmed Azam, Kazuya Haraguchi, Liang Zhao, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] IEEE-ACM Transactions on Computational Biology and Bioinformatics |
| [ 掲載年月 ] 2024年 5月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| Towards provably secure asymmetric image encryption schemes |
| [ 全著者名 ] Naveed Ahmed Azam, Jianshen Zhu, Umar Hayat, Aleksandar Shurbevski |
| [ 掲載誌名 ] INFORMATION SCIENCES |
| [ 掲載年月 ] 2023年 2月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| An inverse QSAR method based on linear regression and integer programming |
| [ 全著者名 ] Jianshen Zhu, Naveed Ahmed Azam, Kazuya Haraguchi, Liang Zhao, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] Frontiers in Bioscience-Landmark |
| [ 掲載年月 ] 2022年 6月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| A new approach to the design of acyclic chemical compounds using skeleton trees and integer linear programming |
| [ 全著者名 ] Fan Zhang, Jianshen Zhu, Aleksandar Shurbevski, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] APPLIED INTELLIGENCE |
| [ 掲載年月 ] 2022年 3月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| A novel method for inferring of chemical compounds with prescribed topological substructures based on integer programming |
| [ 全著者名 ] Jianshen Zhu, Naveed Ahmed Azam, Fan Zhang, Aleksandar Shurbevski, Kazuya Haraguchi, Liang Zhao, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] IEEE-ACM Transactions on Computational Biology and Bioinformatics |
| [ 掲載年月 ] 2021年 9月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| A novel method for inference of acyclic chemical compounds with bounded branch-height based on artificial neural networks and integer programming |
| [ 全著者名 ] Naveed Ahmed Azam, Jianshen Zhu, Yanming Sun, Yu Shi, Aleksandar Shurbevski, Liang Zhao, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] Algorithms for Molecular Biology |
| [ 掲載年月 ] 2021年 8月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| A two-layered model for inferring chemical compounds with integer programming |
| [ 全著者名 ] Yu Shi, Jianshen Zhu, Naveed Ahmed Azam, Kazuya Haraguchi, Liang Zhao, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES |
| [ 掲載年月 ] 2021年 3月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
| A novel method for inference of chemical compounds of cycle index two with desired properties based on artificial neural networks and integer programming |
| [ 全著者名 ] Jianshen Zhu, Chenxi Wang, Aleksandar Shurbevski, Hiroshi Nagamochi, Tatsuya Akutsu |
| [ 掲載誌名 ] Algorithms |
| [ 掲載年月 ] 2020年 5月 |
| [ 著作区分 ] レフェリー付学術論文（外国語） |
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